Provides significant over-representation of functional annotations by single enrichment analysis

Single enrichment analysis using text-mining derived annotations

Finds gene-sets with common annotations coordinately associated to high and/or low values in a ranked gene list by gene-set analysis

Implements gene-set analysis in the context of annotations obtained by text-mining

Gene set analysis (also known as Pathway Based Analysis) in the context of genome-wide association analysis (GWAS) with SNPs or CNVs

Finds annotations that frequently co-occur in a list of genes and rank them by statistical significance

Single enrichment analysis using expression values from public domain experiments (Affymetrix chips)

Single enrichment analysis using expression values from public domain experiments of SAGE

Network enrichment analysis.Finds subnetworks of protein-protein interactions with significant network parameters within a list of genes

It's a tool for functional annotation of (novel) sequences and the analysis of annotation data